Review 
    Novel model organisms and proteomics for a better biological understanding
	Armengaud J, Cardon T, Cristobal S, Matallana-Surget S & Bertile F (2025) Novel model organisms and proteomics for a better biological understanding. Journal of Proteomics, 316, Art. No.: 105441. https://doi.org/10.1016/j.jprot.2025.105441
	
			
     Article 
    The primary molecular influences of marine plastisphere formation and function: Novel insights into organism -organism and -co-pollutant interactions.
	Lee C, Messer L, Holland S, Gutierrez T, Quilliam R & Matallana-Surget S (2024) The primary molecular influences of marine plastisphere formation and function: Novel insights into organism -organism and -co-pollutant interactions.. Critical Reviews in Environmental Science and Technology, 54 (2), pp. 138-161. https://doi.org/10.1080/10643389.2023.2224182
	
			
     Article 
    Diel Cycle Proteomics: Illuminating Molecular Dynamics in Purple Bacteria for Optimized Biotechnological Applications
	Matallana-Surget S, Geron A, Decroo C & Wattiez R (2024) Diel Cycle Proteomics: Illuminating Molecular Dynamics in Purple Bacteria for Optimized Biotechnological Applications. International Journal of Molecular Sciences, 25 (5), p. 2934. https://doi.org/10.3390/ijms25052934
	
			
     Article 
    A closer look at plastic colonisation: Prokaryotic dynamics in established versus newly synthesised marine plastispheres and their planktonic state
	Messer LF, Wattiez R & Matallana-Surget S (2024) A closer look at plastic colonisation: Prokaryotic dynamics in established versus newly synthesised marine plastispheres and their planktonic state. Environmental Pollution, 358 (124479). https://doi.org/10.1016/j.envpol.2024.124479
	
			
     Article 
    Plastic pollution and human pathogens: Towards a conceptual shift in risk management at bathing water and beach environments
	Oliver DM, Metcalf R, Jones DL, Matallana-Surget S, Thomas DN, Robins P, Tulloch CL, Cotterell BM, Williams G, Christie-Oleza JA & Quilliam RS (2024) Plastic pollution and human pathogens: Towards a conceptual shift in risk management at bathing water and beach environments. Water Research, 261, Art. No.: 122028. https://doi.org/10.1016/j.watres.2024.122028
	
			
     Article 
    Novel functional insights into the microbiome inhabiting marine plastic debris: critical considerations to counteract the challenges of thin biofilms using multi-omics and comparative metaproteomics
	Messer LF, Lee CE, Wattiez R & Matallana-Surget S (2024) Novel functional insights into the microbiome inhabiting marine plastic debris: critical considerations to counteract the challenges of thin biofilms using multi-omics and comparative metaproteomics. Microbiome, 12 (1). https://doi.org/10.1186/s40168-024-01751-x
	
			
     Article 
    Clarifying the murk: unveiling bacterial dynamics in response to crude oil pollution, Corexit-dispersant, and natural sunlight in the Gulf of Mexico
	Matallana-Surget S, Nigro LM, Waidner LA, Lebaron P, Wattiez R, Werner J, Fraser R, Dimitrov D, Watt R & Jeffrey WH (2024) Clarifying the murk: unveiling bacterial dynamics in response to crude oil pollution, Corexit-dispersant, and natural sunlight in the Gulf of Mexico. Frontiers in Marine Science, 10. https://doi.org/10.3389/fmars.2023.1337886
	
			
     Article 
    Evidence of interspecific plasmid uptake by pathogenic strains of Klebsiella isolated from microplastic pollution on public beaches
	Metcalf R, Messer LF, White HL, Ormsby MJ, Matallana-Surget S & Quilliam RS (2024) Evidence of interspecific plasmid uptake by pathogenic strains of Klebsiella isolated from microplastic pollution on public beaches. Journal of Hazardous Materials, 461, Art. No.: 132567. https://doi.org/10.1016/j.jhazmat.2023.132567
	
			
     Article 
    Diversifying the concept of model organisms in the age of -omics
	Bertile F, Matallana-Surget S, Tholey A, Cristobal S & Armengaud J (2023) Diversifying the concept of model organisms in the age of -omics. Communications Biology, 6, Art. No.: 1062. https://doi.org/10.1038/s42003-023-05458-x
	
			
     Review 
    Towards the discovery of novel molecular clocks in Prokaryotes
	Matallana-Surget S, Augustin G, Werner J & Wattiez R (2023) Towards the discovery of novel molecular clocks in Prokaryotes. Critical Reviews in Microbiology. https://doi.org/10.1080/1040841X.2023.2220789
	
			
     Editorial 
    Editorial: Environmental omics and their biotechnological applications
	Martínez-Espinosa RM, Armengaud J, Matallana-Surget S & Olaya-Abril A (2023) Editorial: Environmental omics and their biotechnological applications. Frontiers in Microbiology, 14, pp. 1-3. https://doi.org/10.3389/fmicb.2023.1165558
	
			
     Article 
    Priorities to inform research on marine plastic pollution in Southeast Asia
	Omeyer LCM, Duncan EM, Aiemsomboon K, Beaumont N, Bureekul S, Cao B, Carrasco LR, Chavanich S, Clark JR, Cordova MR, Couceiro F, Lee C, Matallana-Surget S, Messer LF & Quilliam R (2022) Priorities to inform research on marine plastic pollution in Southeast Asia. Science of The Total Environment, 841, Art. No.: 156704. https://doi.org/10.1016/j.scitotenv.2022.156704
	
			
     Article 
    Binding, recovery, and infectiousness of enveloped and non-enveloped viruses associated with plastic pollution in surface water
	Moresco V, Charatzidou A, Oliver DM, Weidmann M, Matallana-Surget S & Quilliam RS (2022) Binding, recovery, and infectiousness of enveloped and non-enveloped viruses associated with plastic pollution in surface water. Environmental Pollution, 308, Art. No.: 119594. https://doi.org/10.1016/j.envpol.2022.119594
	
			
     Article 
    From rivers to marine environments: A constantly evolving microbial community within the plastisphere
	Delacuvellerie A, Ballerini T, Frère L, Matallana-Surget S, Dumontet B & Wattiez R (2022) From rivers to marine environments: A constantly evolving microbial community within the plastisphere. Marine Pollution Bulletin, 179, Art. No.: 113660. https://doi.org/10.1016/j.marpolbul.2022.113660
	
			
     Article 
    Diel Protein Regulation of Marine Picoplanktonic Communities Assessed by Metaproteomics
	Géron A, Werner J, Lebaron P, Wattiez R & Matallana-Surget S (2021) Diel Protein Regulation of Marine Picoplanktonic Communities Assessed by Metaproteomics. Microorganisms, 9 (12), Art. No.: 2621. https://doi.org/10.3390/microorganisms9122621
	
			
     Article 
    Shedding light on the bacterial resistance to toxic UV filters: A comparative genomic study
	Lozano C, Lebaron P & Matallana-Surget S (2021) Shedding light on the bacterial resistance to toxic UV filters: A comparative genomic study. PeerJ, 9, Art. No.: e12278. https://doi.org/10.7717/peerj.12278
	
			
     Article 
    Unraveling the molecular effects of oxybenzone on the proteome of an environmentally relevant marine bacterium
	Lozano C, Lee C, Wattiez R, Lebaron P & Matallana-Surget S (2021) Unraveling the molecular effects of oxybenzone on the proteome of an environmentally relevant marine bacterium. Science of The Total Environment, 793, p. 148431. https://doi.org/10.1016/j.scitotenv.2021.148431
	
			
     Article 
    Survival of human enteric and respiratory viruses on plastics in soil, freshwater, and marine environments
	Moresco V, Oliver DM, Weidmann M, Matallana-Surget S & Quilliam RS (2021) Survival of human enteric and respiratory viruses on plastics in soil, freshwater, and marine environments. Environmental Research, 199, Art. No.: 111367. https://doi.org/10.1016/j.envres.2021.111367
	
			
     Article 
    Protein structure, amino acid composition and sequence determine proteome vulnerability to oxidation-induced damage
	Chang RL, Stanley JA, Robinson MC, Sher JW, Li Z, Chan YA, Omdahl AR, Wattiez R, Godzik A & Matallana-Surget S (2020) Protein structure, amino acid composition and sequence determine proteome vulnerability to oxidation-induced damage. EMBO Journal, 39 (23), Art. No.: e104523. https://doi.org/10.15252/embj.2020104523
	
			
     Book Chapter 
    Bioaccumulation and Toxicological Effects of UV-Filters on Marine Species
	Lozano C, Givens J, Stien D, Matallana-Surget S & Lebaron P (2020) Bioaccumulation and Toxicological Effects of UV-Filters on Marine Species. In: Tovar-Sánchez A, Sánchez-Quiles D & Blasco J (eds.) Sunscreens in Coastal Ecosystems: Occurrence, Behavior, Effect and Risk. Handbook of Environmental Chemistry, 94. Cham, Switzerland: Springer, pp. 85-130. https://doi.org/10.1007/698_2019_442
	
			
     Article 
    Toxicity of UV filters on marine bacteria: Combined effects with damaging solar radiation
	Lozano C, Matallana-Surget S, Givens J, Nouet S, Arbuckle L, Lambert Z & Lebaron P (2020) Toxicity of UV filters on marine bacteria: Combined effects with damaging solar radiation. Science of The Total Environment, 722, Art. No.: 137803. https://doi.org/10.1016/j.scitotenv.2020.137803
	
			
     Article 
    mPies: a novel metaproteomics tool for the creation of relevant protein databases and automatized protein annotation
	Werner J, Géron A, Kerssemakers J & Matallana-Surget S (2019) mPies: a novel metaproteomics tool for the creation of relevant protein databases and automatized protein annotation. Biology Direct, 14 (1), Art. No.: 21. https://doi.org/10.1186/s13062-019-0253-x
	
			
     Article 
    Deciphering the Functioning of Microbial Communities: Shedding Light on the Critical Steps in Metaproteomics
	Géron A, Werner J, Wattiez R, Lebaron P & Matallana-Surget S (2019) Deciphering the Functioning of Microbial Communities: Shedding Light on the Critical Steps in Metaproteomics. Frontiers in Microbiology, 10, Art. No.: 2395. https://doi.org/10.3389/fmicb.2019.02395
	
			
     Article 
    Proteogenomic Analysis of Epibacterium Mobile BBCC367, a Relevant Marine Bacterium Isolated From the South Pacific Ocean
	Matallana-Surget S, Werner J, Wattiez R, Lebaron K, Intertaglia L, Regan C, Morris J, Teeling H, Ferrer M, Golyshin PN, Gerogiorgis D, Reilly SI & Lebaron P (2018) Proteogenomic Analysis of Epibacterium Mobile BBCC367, a Relevant Marine Bacterium Isolated From the South Pacific Ocean. Frontiers in Microbiology, 9, Art. No.: 3125. https://doi.org/10.3389/fmicb.2018.03125
	
			
     Article 
    Bacterial survival under extreme UV radiation: A comparative proteomics study of Rhodobacter sp., isolated from high altitude wetlands in Chile
	Perez VA, Hengst MB, Kurte L, Dorador C, Jeffrey WH, Wattiez R, Molina V & Matallana-Surget S (2017) Bacterial survival under extreme UV radiation: A comparative proteomics study of Rhodobacter sp., isolated from high altitude wetlands in Chile. Frontiers in Microbiology, 8, Art. No.: 1173. https://doi.org/10.3389/fmicb.2017.01173
	
			
     Article 
    Proteome-wide analysis and diel proteomic profiling in the cyanobacterium Arthrospira platensis PCC 8005
	Matallana-Surget S, Derock J, Baptiste L, Badri H, Deschoenmaeker F & Wattiez R (2014) Proteome-wide analysis and diel proteomic profiling in the cyanobacterium Arthrospira platensis PCC 8005. PLoS ONE, 9 (6), Art. No.: e99076. https://doi.org/10.1371/journal.pone.0099076
	
			
     Article 
    Impact of Solar Radiation on Gene Expression in Bacteria
	Matallana-Surget S & Wattiez R (2013) Impact of Solar Radiation on Gene Expression in Bacteria. Proteomes, 1 (2), pp. 70-86. https://doi.org/10.3390/proteomes1020070
	
			
     Article 
    Shotgun redox proteomics: identification and quantitation of carbonylated proteins in the UVB resistant marine bacterium, Photobacterium angustum S14
	Matallana-Surget S, Cavicchioli R, Fauconnier C, Wattiez R, Baptiste L, Joux F, Raftery M & Lebaron P (2013) Shotgun redox proteomics: identification and quantitation of carbonylated proteins in the UVB resistant marine bacterium, Photobacterium angustum S14. PLoS ONE, 8 (7), Art. No.: e68112. https://doi.org/10.1371/journal.pone.0068112
	
			
     Book Chapter 
    Analysis of Isotopic Labelling Vs. Label-Free Approaches for Quantitative Proteomics.
	Baptiste L, Houyoux N, Matallana-Surget S & Wattiez R (2012) Analysis of Isotopic Labelling Vs. Label-Free Approaches for Quantitative Proteomics.. In: Leung H, Man T & Flores R (eds.) Integrative Proteomics. Croatia: InTech, pp. 327-346. http://www.intechopen.com/books/integrative-proteomics; https://doi.org/10.5772/2473
	
			
     Article 
    Proteome analysis of the UVB-resistant marine bacterium Photobacterium angustum S14
	Matallana-Surget S, Joux F, Wattiez R & Lebaron P (2012) Proteome analysis of the UVB-resistant marine bacterium Photobacterium angustum S14. PLoS ONE, 7 (8), Art. No.: e42299. https://doi.org/10.1371/journal.pone.0042299
	
			
     Book Chapter 
    Physiology of marine oligotrophic ultramicrobacteria
	Williams T, Joux F, Lauro F, Matallana-Surget S & Cavicchioli R (2011) Physiology of marine oligotrophic ultramicrobacteria. In: Horikoshi K, Antranikian G, Bull A, Robb F & Stetter K (eds.) Extremophiles Handbook. Japan: Springer, pp. 1179-1199. http://www.springer.com/gp/book/9784431538974
	
			
     Article 
    Shotgun proteomics: concept, key points and data mining
	Matallana-Surget S, Baptiste L & Wattiez R (2010) Shotgun proteomics: concept, key points and data mining. Expert Review of Proteomics, 7 (1), pp. 5-7. https://doi.org/10.1586/epr.09.101
	
			
     Article 
    Influence of growth temperature and starvation state on survival and DNA damage induction in the marine bacterium Sphingopyxis alaskensis exposed to UV radiation
	Matallana-Surget S, Douki T, Meador J, Cavicchioli R & Joux F (2010) Influence of growth temperature and starvation state on survival and DNA damage induction in the marine bacterium Sphingopyxis alaskensis exposed to UV radiation. Journal of Photochemistry and Photobiology B: Biology, 100 (2), pp. 51-56. https://doi.org/10.1016/j.jphotobiol.2010.05.001
	
			
     Article 
    The response of the marine bacterium Sphingopyxis alaskensis to solar radiation assessed by quantitative proteomics
	Matallana-Surget S, Joux F, Raftery M & Cavicchioli R (2009) The response of the marine bacterium Sphingopyxis alaskensis to solar radiation assessed by quantitative proteomics. Environmental Microbiology, 11 (10), pp. 2660-2675. https://doi.org/10.1111/j.1462-2920.2009.01992.x
	
			
     Article 
    Remarkable resistance to UVB of the marine bacterium Photobacterium angsutum explained by an unexpected role of photolyase
	Matallana-Surget S, Douki T, Cavicchioli R & Joux F (2009) Remarkable resistance to UVB of the marine bacterium Photobacterium angsutum explained by an unexpected role of photolyase. Photochemical and Photobiological Sciences, 8 (9), pp. 1313-1320. https://doi.org/10.1039/B902715G
	
			
     Article 
    Effect of the GC content of DNA on the distribution of UVB-induced bipyrimidine photoproducts
	Matallana-Surget S, Meador J, Joux F & Douki T (2008) Effect of the GC content of DNA on the distribution of UVB-induced bipyrimidine photoproducts. Photochemical and Photobiological Sciences, 7 (7), pp. 794-801. https://doi.org/10.1039/B719929E
	
			
     Article 
    Physiological alteration of the marine bacterium Vibrio angustum S14 exposed to simulated sunlight during growth
	Abboudi M, Matallana-Surget S, Rontani J, Sempéré R & Joux F (2008) Physiological alteration of the marine bacterium Vibrio angustum S14 exposed to simulated sunlight during growth. Current Microbiology, 57 (5), pp. 412-417. https://doi.org/10.1007/s00284-008-9214-9
	
			
     Article 
    Isolation and characterization of oligotrophic marine bacteria
	Matallana-Surget S, Joux F, Lebaron P & Cavicchioli R (2007) Isolation and characterization of oligotrophic marine bacteria. Journal de la Societe de Biologie, 201 (1), pp. 41-50. http://www.biologie-journal.org/articles/jbio/abs/2007/01/contents/contents.html; https://doi.org/10.1051/jbio%3A2007005