School of Life and Environmental Sciences

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Book Chapter

Contourite Drifts and Associated Bedforms

Esentia I, Stow D & Smillie Z (2018) Contourite Drifts and Associated Bedforms. In: Micallef A, Krastel S & Savini A (eds.) Submarine Geomorphology. Springer Geology. Cham, Switzerland: Springer, pp. 301-331. https://doi.org/10.1007/978-3-319-57852-1_16

Conference Paper (unpublished)

Contourite facies and cyclicity: a geostatistical approach

Pan J, Stow D & Smillie Z (2018) Contourite facies and cyclicity: a geostatistical approach. The 57th British Sedimentological Research Group (BSRG) Annual General Meeting, 17.12.2018-20.12.2018. http://www.lyellcentre.ac.uk/news/bsrg.html

Conference Paper (unpublished)

Deepwater dolomites and associated hiatuses in Gulf of Cadiz contourites

Smillie Z, Stow D, Sierro FJ, Alonso-Garcia M, Jiménez-Espejo FJ, Buckman J, Ducassou E, Boyce AJ & Pratscher J (2018) Deepwater dolomites and associated hiatuses in Gulf of Cadiz contourites. The 57th British Sedimentological Research Group (BSRG) Annual General Meeting, Edinburgh, 17.12.2018-20.12.2018. http://www.lyellcentre.ac.uk/news/bsrg.html

Conference Paper (unpublished)

The Contourite Sequence: A 21st Century Update

Stow D, Smillie Z, Jiawei P, Brackenridge R & Bankole S (2018) The Contourite Sequence: A 21st Century Update. The 57th British Sedimentological Research Group (BSRG) Annual General Meeting, Edinburgh, 17.12.2018-20.12.2018. http://www.lyellcentre.ac.uk/news/bsrg.html

Manual / Guide

Large Marine Ecosystems Governance Toolkit

Wawrzynski W, Wenzel L, Mahon R, Varmer O, Hassan D, Kannen A, Ross SA, Kelley E, Johannesen E, Hudson A, Awad A, Stead S, Trumbic I, Hamid M & Polsenberg J (2018) Large Marine Ecosystems Governance Toolkit. Paris, France: GEF LME:LEARN.

Article

Galleria mellonella as an infection model for the multi-host pathogen Streptococcus agalactiae reflects hypervirulence of strains associated with human invasive disease

Six A, Krajangwong S, Crumlish M, Zadoks RN & Walker D (2018) Galleria mellonella as an infection model for the multi-host pathogen Streptococcus agalactiae reflects hypervirulence of strains associated with human invasive disease. Virulence, 10 (1), pp. 600-609. https://doi.org/10.1080/21505594.2019.1631660

Article

Wind and trophic status explain within and among-lake variability of algal biomass: Variability of phytoplankton biomass

Rusak JA, Tanentzap AJ, Klug JL, Rose KC, Hendricks SP, Jennings E, Laas A, Pierson D, Ryder E, Smyth RL, White DS, Winslow LA, Adrian R, Arvola L & Jones ID (2018) Wind and trophic status explain within and among-lake variability of algal biomass: Variability of phytoplankton biomass. Limnology and Oceanography Letters, 3 (6), pp. 409-418. https://doi.org/10.1002/lol2.10093

Conference Paper (published)

Monitoring Agricultural Fields Using an Optimisation of the Difference of Covariance Matrices for Polsar

Silva C, Marino A, Lopez-Sanchez JM & Cameron I (2018) Monitoring Agricultural Fields Using an Optimisation of the Difference of Covariance Matrices for Polsar. In: Proceedings of 2018 IEEE International Geoscience and Remote Sensing Symposium. IGARSS 2018 - 2018 IEEE International Geoscience and Remote Sensing Symposium, Valencia, Spain, 22.07.2018-27.07.2018. Piscataway, NJ, USA: IEEE. https://doi.org/10.1109/igarss.2018.8519267

Book Chapter

GIS Technologies for Sustainable Aquaculture

Falconer L, Telfer T, Pham KL & Ross L (2018) GIS Technologies for Sustainable Aquaculture. In: Huang B (ed.) Comprehensive Geographic Information Systems, Vol. 2. Reference Module in Earth Systems and Environmental Sciences. Oxford: Elsevier, pp. 290-314. http://www.sciencedirect.com/science/article/pii/B9780124095489104592; https://doi.org/10.1016/B978-0-12-409548-9.10459-2

Article

Proteogenomic Analysis of Epibacterium Mobile BBCC367, a Relevant Marine Bacterium Isolated From the South Pacific Ocean

Matallana-Surget S, Werner J, Wattiez R, Lebaron K, Intertaglia L, Regan C, Morris J, Teeling H, Ferrer M, Golyshin PN, Gerogiorgis D, Reilly SI & Lebaron P (2018) Proteogenomic Analysis of Epibacterium Mobile BBCC367, a Relevant Marine Bacterium Isolated From the South Pacific Ocean. Frontiers in Microbiology, 9, Art. No.: 3125. https://doi.org/10.3389/fmicb.2018.03125

Article

Asteroid Ryugu before the Hayabusa2 encounter

Wada K, Grott M, Michel P, Walsh KJ, Barucci AM, Biele J, Blum J, Ernst CM, Grundmann JT, Gundlach B, Hagermann A, Hamm M, Jutzi M, Kim M & Le Corre L (2018) Asteroid Ryugu before the Hayabusa2 encounter. Progress in Earth and Planetary Science, 5 (1), Art. No.: 82. https://doi.org/10.1186/s40645-018-0237-y

Article

Assessing the impact of Bacillus strains mixture probiotic on water quality, growth performance, blood profile and intestinal morphology of Nile tilapia, Oreochromis niloticus

Elsabagh M, Mohamed R, Moustafa EM, Hamza A, Farrag F, Decamp O, Dawood MA & Eltholth M (2018) Assessing the impact of Bacillus strains mixture probiotic on water quality, growth performance, blood profile and intestinal morphology of Nile tilapia, Oreochromis niloticus. Aquaculture Nutrition, 24 (6), pp. 1613-1622. https://doi.org/10.1111/anu.12797

Article

Species Distribution Modelling: Contrasting presence-only models with plot abundance data

Gomes VHF, IJff SD, Raes N, Amaral IL, Salomão RP, de Souza Coelho L, de Almeida Matos FD, Castilho CV, de Andrade Lima Filho D, López DC, Guevara JE, Magnusson WE, Phillips OL, Wittmann F & Silva TSF (2018) Species Distribution Modelling: Contrasting presence-only models with plot abundance data. Scientific Reports, 8 (1), Art. No.: 1003. https://doi.org/10.1038/s41598-017-18927-1

Article

Geographic and temporal variations in turbulent heat loss from lakes: A global analysis across 45 lakes: A global turbulent heat flux analysis across lakes

Woolway RI, Verburg P, Lenters JD, Merchant CJ, Hamilton DP, Brookes J, de Eyto E, Kelly S, Healey NC, Hook S, Laas A, Pierson D, Rusak JA, Kuha J & Jones ID (2018) Geographic and temporal variations in turbulent heat loss from lakes: A global analysis across 45 lakes: A global turbulent heat flux analysis across lakes. Limnology and Oceanography, 63 (6), pp. 2436-2449. https://doi.org/10.1002/lno.10950

Article

Signatures of degraded body tissues and environmental conditions in grave soils from a Roman and an Anglo-Scandinavian age burial from Hungate, York

Pickering MD, Ghislandi S, Usai MR, Wilson C, Connelly P, Brothwell DR & Keeley BJ (2018) Signatures of degraded body tissues and environmental conditions in grave soils from a Roman and an Anglo-Scandinavian age burial from Hungate, York. Journal of Archaeological Science, 99, pp. 87-98. https://doi.org/10.1016/j.jas.2018.08.007

Article

Calanus finmarchicus seasonal cycle and diapause in relation to gene expression, physiology, and endogenous clocks: Calanus finmarchicus seasonal rhythmicity

Häfker NS, Teschke M, Last KS, Pond DW, Hüppe L & Meyer B (2018) Calanus finmarchicus seasonal cycle and diapause in relation to gene expression, physiology, and endogenous clocks: Calanus finmarchicus seasonal rhythmicity. Limnology and Oceanography, 63 (6), pp. 2815-2838. https://doi.org/10.1002/lno.11011

Article

ENSO Drives interannual variation of forest woody growth across the tropics

Rifai SW, Girardin CAJ, Berenguer E, del Aguila-Pasquel J, Dahlsjö CAL, Doughty CE, Jeffery KJ, Moore S, Oliveras I, Riutta T, Rowland LM, Murakami AA, Addo-Danso SD, Abernethy KA & White LJT (2018) ENSO Drives interannual variation of forest woody growth across the tropics. Philosophical Transactions of the Royal Society B: Biological Sciences, 373 (1760), Art. No.: 20170410. https://doi.org/10.1098/rstb.2017.0410

Book Chapter

What kind of history in prehistory?

Bayliss A & Whittle A (2018) What kind of history in prehistory?. In: Souvatzi S, Baysal A & Baysal E (eds.) Time and history in prehistory. Abingdon: Taylor & Francis (Routledge), pp. 123-146.

Technical Report

Towards a Sustainable, Participatory and Inclusive Wild Meat Sector

Coad L, Fa JE, Abernethy K, Van Vliet N, Santamaria C, Wilkie D, El Bizri HR, Ingram DJ, Cawthorn D & Nasi R (2018) Towards a Sustainable, Participatory and Inclusive Wild Meat Sector. Convention on Biological Diversity Secretariat. Montreal, Canada. https://www.cbd.int/doc/c/8ca9/8f95/d06a6f4d99339baebd13648a/cop-14-inf-07-en.pdf

Article

Contribution and stability of forest-derived soil organic carbon during woody encroachment in a tropical savanna. A case study in Gabon

Chiti T, Rey A, Jeffery K, Lauteri M, Mihindou V, Malhi Y, Marzaioli F, White LJT & Valentini R (2018) Contribution and stability of forest-derived soil organic carbon during woody encroachment in a tropical savanna. A case study in Gabon. Biology and Fertility of Soils, 54 (8), pp. 897-907. https://doi.org/10.1007/s00374-018-1313-6

Article

Effects of replacing fishmeal with black soldier fly larval meal in the diets of grower-finishing guinea fowls reared under tropical conditions

Wallace PA, Nyameasem JK, Adu-Aboagye GA, Affedzie-Obresi S, Nkegbe EK, Murray F, Botchway V, Karbo N, Leschen W, Maquart P & Clottey V (2018) Effects of replacing fishmeal with black soldier fly larval meal in the diets of grower-finishing guinea fowls reared under tropical conditions. Tropical Animal Health and Production, 50 (7), pp. 1499-1507. https://doi.org/10.1007/s11250-018-1588-5

Article

Comparison of Small- and Large-Footprint Lidar Characterization of Tropical Forest Aboveground Structure and Biomass: A Case Study From Central Gabon

Silva CA, Saatchi SS, Garcia M, Labriere N, Klauberg C, Ferraz A, Meyer V, Jeffery KJ, Abernethy K, White L, Zhao K, Lewis S & Hudak AT (2018) Comparison of Small- and Large-Footprint Lidar Characterization of Tropical Forest Aboveground Structure and Biomass: A Case Study From Central Gabon. IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing, 11 (10), pp. 3512-3526. https://doi.org/10.1109/JSTARS.2018.2816962

Article

In Situ Reference Datasets From the TropiSAR and AfriSAR Campaigns in Support of Upcoming Spaceborne Biomass Missions

Labriere N, Tao S, Chave J, Scipal K, Toan TL, Abernethy K, Alonso A, Barbier N, Bissiengou P, Casal T, Davies SJ, Ferraz A, Hérault B, Jeffery KJ & White LJT (2018) In Situ Reference Datasets From the TropiSAR and AfriSAR Campaigns in Support of Upcoming Spaceborne Biomass Missions. IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing, 11 (10), pp. 3617-3627. https://doi.org/10.1109/jstars.2018.2851606

Presentation / Talk

Behavioural fever in fish

Rey Planellas S (2018) Behavioural fever in fish [Fever in fish]. Pharmaqacademy, Inverness, 29.10.2018-30.10.2018.

Article

Retention of fatty acyl desaturase 1 (fads1) in Elopomorpha and Cyclostomata provides novel insights into the evolution of long-chain polyunsaturated fatty acid biosynthesis in vertebrates

Lopes-Marques M, Kabeya N, Qian Y, Ruivo R, Santos M, Venkatesh B, Tocher DR, Castro LFC & Monroig O (2018) Retention of fatty acyl desaturase 1 (fads1) in Elopomorpha and Cyclostomata provides novel insights into the evolution of long-chain polyunsaturated fatty acid biosynthesis in vertebrates. BMC Evolutionary Biology, 18, Art. No.: 157. https://doi.org/10.1186/s12862-018-1271-5

Article

Ice marginal dynamics of the last British-Irish Ice Sheet in the southern North Sea: Ice limits, timing and the influence of the Dogger Bank

Roberts DH, Evans DJA, Callard SL, Clark CD, Bateman MD, Medialdea A, Dove D, Cotterill CJ, Saher M, Ó'Cofaigh C, Chiverrell RC, Moreton SG, Fabel D & Bradwell T (2018) Ice marginal dynamics of the last British-Irish Ice Sheet in the southern North Sea: Ice limits, timing and the influence of the Dogger Bank. Quaternary Science Reviews, 198, pp. 181-207. https://doi.org/10.1016/j.quascirev.2018.08.010

Article

The relationship between the abundance of the Nigeria-Cameroon chimpanzee (Pan troglodytes ellioti) and its habitat: a conservation concern in Mbam-Djerem National Park, Cameroon

Kamgang SA, Bobo KS, Maisels F, Ambahe RDD, Ambassa Ongono DE, Gonder MK, Johnson P, Marino J & Sinsin B (2018) The relationship between the abundance of the Nigeria-Cameroon chimpanzee (Pan troglodytes ellioti) and its habitat: a conservation concern in Mbam-Djerem National Park, Cameroon. BMC Ecology, 18, Art. No.: 40. https://doi.org/10.1186/s12898-018-0199-3

Article

Application of passive-acoustic telemetry to explore the behaviour of ballan wrasse (Labrus bergylta) and lumpfish (Cyclopterus lumpus) in commercial Scottish salmon sea-pens

Leclercq E, Zerafa B, Brooker AJ, Davie A & Migaud H (2018) Application of passive-acoustic telemetry to explore the behaviour of ballan wrasse (Labrus bergylta) and lumpfish (Cyclopterus lumpus) in commercial Scottish salmon sea-pens. Aquaculture, 495, pp. 1-12. https://doi.org/10.1016/j.aquaculture.2018.05.024

Article

Critical variability exists in the digestible value of raw materials fed to black tiger shrimp, Penaeus monodon: The characterisation and digestibility assessment of a series of research and commercial raw materials

Glencross B, Blyth D, Wade N & Arnold S (2018) Critical variability exists in the digestible value of raw materials fed to black tiger shrimp, Penaeus monodon: The characterisation and digestibility assessment of a series of research and commercial raw materials. Aquaculture, 495, pp. 214-221. https://doi.org/10.1016/j.aquaculture.2018.05.026

Article

Parallel evolution and adaptation to environmental factors in a marine flatfish: Implications for fisheries and aquaculture management of the turbot (Scophthalmus maximus)

Prado FDd, Vera M, Hermida M, Bouza C, Pardo BG, Vilas R, Blanco A, Fernandez C, Maroso F, Maes GE, Turan C, Volckaert FAMJ, Taggart J, Carr A & Ogden R (2018) Parallel evolution and adaptation to environmental factors in a marine flatfish: Implications for fisheries and aquaculture management of the turbot (Scophthalmus maximus). Evolutionary Applications, 11 (8), pp. 1322-1341. https://doi.org/10.1111/eva.12628