Institute of Aquaculture

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Conference Paper (published)

Ir-Man: An Information Retrieval Framework for Marine Animal Necropsy Analysis

Carmichael AFB, Bhowmik D, Baily J, Brownlow A, Gunn GJ & Reeves A (2020) Ir-Man: An Information Retrieval Framework for Marine Animal Necropsy Analysis. In: BCB '20: Proceedings of the 11th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics. 11th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics (ACM-BCB 2020), Virtual, 21.09.2020-24.09.2020. New York: ACM, p. 67. https://doi.org/10.1145/3388440.3412417

Article

Development of a C18 Supercritical Fluid Chromatography-Tandem Mass Spectrometry Methodology for the Analysis of Very-Long-Chain Polyunsaturated Fatty Acid Lipid Matrices and Its Application to Fish Oil Substitutes Derived from Genetically Modified Oilseeds in the Aquaculture Sector

Broughton R, Tocher DR & Betancor MB (2020) Development of a C18 Supercritical Fluid Chromatography-Tandem Mass Spectrometry Methodology for the Analysis of Very-Long-Chain Polyunsaturated Fatty Acid Lipid Matrices and Its Application to Fish Oil Substitutes Derived from Genetically Modified Oilseeds in the Aquaculture Sector. ACS Omega, 5 (35), pp. 22289-22298. https://doi.org/10.1021/acsomega.0c02631

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Dietary fenofibrate attenuated high-fat-diet-induced lipid accumulation and inflammation response partly through regulation of pparα and sirt1 in juvenile black seabream (Acanthopagrus schlegelii)

Jin M, Zhu T, Tocher D, Luo J, Shen Y, Li X, Pan T, Yuan Y, Betancor M, Jiao L, Sun P & Zhou Q (2020) Dietary fenofibrate attenuated high-fat-diet-induced lipid accumulation and inflammation response partly through regulation of pparα and sirt1 in juvenile black seabream (Acanthopagrus schlegelii). Developmental and Comparative Immunology, 109, Art. No.: 103691. https://doi.org/10.1016/j.dci.2020.103691

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Toxicological mechanism of excessive copper supplementation: Effects on coloration, copper bioaccumulation and oxidation resistance in mud crab Scylla paramamosain

Luo J, Zhu T, Wang X, Chen X, Yuan Y, Jin M, Betancor M, Tocher D & Zhou Q (2020) Toxicological mechanism of excessive copper supplementation: Effects on coloration, copper bioaccumulation and oxidation resistance in mud crab Scylla paramamosain. Journal of Hazardous Materials, 395, Art. No.: 122600. https://doi.org/10.1016/j.jhazmat.2020.122600

Article

Visualizing the Social in Aquaculture: How Social Dimension Components Illustrate the Effects of Aquaculture across Geographic Scales

Krause G, Billing S, Dennis J, Grant J, Fanning L, Filgueira R, Miller M, Perez Agúndez JA, Stybel N, Stead SM & Wawrzynski W (2020) Visualizing the Social in Aquaculture: How Social Dimension Components Illustrate the Effects of Aquaculture across Geographic Scales. Marine Policy, 118, Art. No.: 103985. https://doi.org/10.1016/j.marpol.2020.103985

Article

The miR-15/16 Cluster Is Involved in the Regulation of Vertebrate LC-PUFA Biosynthesis by Targeting pparγ as Demonostrated in Rabbitfish Siganus canaliculatus

Sun J, Chen C, You C, Liu Y, Ma H, Monroig Ó, Tocher DR, Wang S & Li Y (2020) The miR-15/16 Cluster Is Involved in the Regulation of Vertebrate LC-PUFA Biosynthesis by Targeting pparγ as Demonostrated in Rabbitfish Siganus canaliculatus. Marine Biotechnology, 22 (4), p. 475–487. https://doi.org/10.1007/s10126-020-09969-0

Article

Interaction between ω 6 and ω 3 fatty acids of different chain lengths regulates Atlantic salmon hepatic gene expression and muscle fatty acid profiles

Emam M, Katan T, Caballero-Solares A, Taylor RG, Parrish KS, Rise ML & Parrish CC (2020) Interaction between ω 6 and ω 3 fatty acids of different chain lengths regulates Atlantic salmon hepatic gene expression and muscle fatty acid profiles. Philosophical Transactions of the Royal Society B: Biological Sciences, 375 (1804), Art. No.: 20190648. https://doi.org/10.1098/rstb.2019.0648

Article

Dietary clenbuterol modifies the expression of genes involved in the regulation of lipid metabolism and growth in the liver, skeletal muscle, and adipose tissue of Nile tilapia (Oreochromis niloticus)

Mohamed RA, Elbialy ZI, Abd El Latif AS, Shukry M, Assar DH, El Nokrashy AM, Elsheshtawy A, Dawood MAO, Paray BA, Doan HV & El-Far AH (2020) Dietary clenbuterol modifies the expression of genes involved in the regulation of lipid metabolism and growth in the liver, skeletal muscle, and adipose tissue of Nile tilapia (Oreochromis niloticus). Aquaculture Reports, 17, Art. No.: 100319. https://doi.org/10.1016/j.aqrep.2020.100319

Article

Central and peripheral clocks in Atlantic bluefin tuna (Thunnus thynnus, L.): Daily rhythmicity of hepatic lipid metabolism and digestive genes

Betancor M, Sprague M, Ortega A, de la Gándara F, Tocher D, Ruth R, Perkins E & Mourente G (2020) Central and peripheral clocks in Atlantic bluefin tuna (Thunnus thynnus, L.): Daily rhythmicity of hepatic lipid metabolism and digestive genes. Aquaculture, 523, Art. No.: 735220. https://doi.org/10.1016/j.aquaculture.2020.735220

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Using fatty acid markers to distinguish between effects of salmon (Salmo salar) and halibut (Hippoglossus hippoglossus) farming on mackerel (Scomber scombrus) and whiting (Merlangius merlangus)

Ghanawi J & McAdam BJ (2020) Using fatty acid markers to distinguish between effects of salmon (Salmo salar) and halibut (Hippoglossus hippoglossus) farming on mackerel (Scomber scombrus) and whiting (Merlangius merlangus). Aquaculture Research, 51 (6), pp. 2229-2242. https://doi.org/10.1111/are.14568

Article

Exploring the relationship between stress coping styles and sex, origin and reproductive success, in Senegalese sole (Solea senegalensis) breeders in captivity

Ibarra-Zatarain Z, Martín I, Rasines I, Fatsini E, Rey S, Chereguini O & Duncan N (2020) Exploring the relationship between stress coping styles and sex, origin and reproductive success, in Senegalese sole (Solea senegalensis) breeders in captivity. Physiology and Behavior, 220, Art. No.: 112868. https://doi.org/10.1016/j.physbeh.2020.112868

Article

Biological, socio-economic, and administrative opportunities and challenges to moving aquaculture offshore for small French oyster-farming companies

Barillé L, Bris AL, Goulletquer P, Thomas Y, Glize P, Kane F, Falconer L, Guillotreau P, Trouillet B, Palmer S & Gernez P (2020) Biological, socio-economic, and administrative opportunities and challenges to moving aquaculture offshore for small French oyster-farming companies. Aquaculture, 521, Art. No.: 735045. https://doi.org/10.1016/j.aquaculture.2020.735045

Article

Liver Transcriptome Profiling Reveals That Dietary DHA and EPA Levels Influence Suites of Genes Involved in Metabolism, Redox Homeostasis, and Immune Function in Atlantic Salmon (Salmo salar)

Xue X, Hall JR, Caballero-Solares A, Eslamloo K, Taylor RG, Parrish CC & Rise M (2020) Liver Transcriptome Profiling Reveals That Dietary DHA and EPA Levels Influence Suites of Genes Involved in Metabolism, Redox Homeostasis, and Immune Function in Atlantic Salmon (Salmo salar). Marine Biotechnology, 22, pp. 263-284. https://doi.org/10.1007/s10126-020-09950-x

Article

Pre-deployment acclimatisation of farmed ballan wrasse (Labrus bergylta) to sea-cage conditions promotes behaviour analogous to wild conspecifics when used as cleaner fish in Atlantic salmon (Salmo salar) farms

Brooker AJ, Davie A, Leclercq E, Zerafa B & Migaud H (2020) Pre-deployment acclimatisation of farmed ballan wrasse (Labrus bergylta) to sea-cage conditions promotes behaviour analogous to wild conspecifics when used as cleaner fish in Atlantic salmon (Salmo salar) farms. Aquaculture, 520, Art. No.: 734771. https://doi.org/10.1016/j.aquaculture.2019.734771

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Growth performance, nutrient digestibility and intestinal morphology of rainbow trout (Oncorhynchus mykiss) fed graded levels of the yeasts Saccharomyces cerevisiae and Wickerhamomyces anomalus

Vidakovic A, Huyben D, Sundh H, Nyman A, Vielma J, Passoth V, Kiessling A & Lundh T (2020) Growth performance, nutrient digestibility and intestinal morphology of rainbow trout (Oncorhynchus mykiss) fed graded levels of the yeasts Saccharomyces cerevisiae and Wickerhamomyces anomalus. Aquaculture Nutrition, 26 (2), pp. 275-286. https://doi.org/10.1111/anu.12988

Article

Modification of nutritional values and flavor qualities of muscle of swimming crab (Portunus trituberculatus): Application of a dietary lipid nutrition strategy

Yuan Y, Wang X, Jin M, Jiao L, Sun P, Betancor MB, Tocher DR & Zhou Q (2020) Modification of nutritional values and flavor qualities of muscle of swimming crab (Portunus trituberculatus): Application of a dietary lipid nutrition strategy. Food Chemistry, 308 p. 11, Art. No.: 125607. https://doi.org/10.1016/j.foodchem.2019.125607

Article

Cognitive appraisal in fish: stressor predictability modulates the physiological and neurobehavioural stress response in sea bass

Cerqueira M, Millot S, Felix A, Silva T, Oliveira GA, Oliveira CCV, Rey S, MacKenzie S & Oliveira R (2020) Cognitive appraisal in fish: stressor predictability modulates the physiological and neurobehavioural stress response in sea bass. Proceedings of the Royal Society B: Biological Sciences, 287 (1923), Art. No.: 20192922. https://doi.org/10.1098/rspb.2019.2922

Article

Impact of rearing temperature on the innate antiviral immune response of growth hormone transgenic female triploid Atlantic salmon (Salmo salar)

Ignatz EH, Braden LM, Benfey TJ, Caballero-Solares A, Hori TS, Runighan CD, Fast MD, Westcott JD & Rise ML (2020) Impact of rearing temperature on the innate antiviral immune response of growth hormone transgenic female triploid Atlantic salmon (Salmo salar). Fish & Shellfish Immunology, 97, pp. 656-668. https://doi.org/10.1016/j.fsi.2019.12.081

Article

Effects of dietary Nannochloropsis sp. powder and lipids on the growth performance and fatty acid composition of larval and postlarval kuruma shrimp, Marsupenaeus japonicus

Adissin TOO, Manabu I, Shunsuke K, Saichiro Y, Moss AS & Dossou S (2020) Effects of dietary Nannochloropsis sp. powder and lipids on the growth performance and fatty acid composition of larval and postlarval kuruma shrimp, Marsupenaeus japonicus. Aquaculture Nutrition, 26 (1), pp. 186-200. https://doi.org/10.1111/anu.12980

Article

Long-chain polyunsaturated fatty acid metabolism in carnivorous marine teleosts: insight into the profile of endogenous biosynthesis in golden pompano Trachinotus ovatus

Wang S, Wang M, Zhanga H, Yana X, Guoa H, You C, Tocher DR, Chen C & Li Y (2020) Long-chain polyunsaturated fatty acid metabolism in carnivorous marine teleosts: insight into the profile of endogenous biosynthesis in golden pompano Trachinotus ovatus. Aquaculture Research, 51 (2), pp. 623-635. https://doi.org/10.1111/are.14410