Institute of Aquaculture

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Article

Salmon Data Mobilization

Diack G, Bird T, Akenhead S, Bayer J, Brophy D, Bull C, de Eyto E, Johnson B, Jones M, Knight A, Nevoux M, van der Stap T & Walker A (2024) Salmon Data Mobilization. North Pacific Anadromous Fish Commission Bulletin, (7), pp. 61-76. https://doi.org/10.23849/npafcb7/x3rlpo23a

Article

High-density linkage map and single nucleotide polymorphism association with whole weight, meat yield, and shell shape in the Portuguese oyster, Crassostrea angulate

Vu S, Kumar M, Rastas P, Boudry P, Gheyas A, Bean T, Nguyen M, Tran K, Geist J, Nguyen H, O’Connor W, Tran H, Le T, Cao G, Nguyen T & Vu I (2024) High-density linkage map and single nucleotide polymorphism association with whole weight, meat yield, and shell shape in the Portuguese oyster, Crassostrea angulate. Aquaculture International, 32, p. 10109–10122. https://doi.org/10.1007/s10499-024-01652-8

Article

Building towards One Health: A Transdisciplinary Autoethnographic Approach to Understanding Perceptions of Sustainable Aquatic Foods in Vietnam

Li S, Ang SY, Hunter AM, Erdem S, Bostock J, Da CT, Nguyen NT, Moss A, Hope W, Howie C, Newton R, Casteleiro MA & Little D (2024) Building towards One Health: A Transdisciplinary Autoethnographic Approach to Understanding Perceptions of Sustainable Aquatic Foods in Vietnam. Sustainability, 16 (24), pp. 1-23, Art. No.: 10865. https://www.mdpi.com/2071-1050/16/24/10865; https://doi.org/10.3390/su162410865

Book Chapter

Global Aquaculture systems

Norman R, Chivite Alcalde M, Bron J, Burke M, Crumlish M, Gheyas A, Little D, Malcorps W, Moss A, Newton R & Pounds A (2024) Global Aquaculture systems. In: Alexander P (ed.) Encyclopedia of Agriculture and Food Systems. 3 ed. Elsevier. https://shop.elsevier.com/books/encyclopedia-of-agriculture-and-food-systems/alexander/978-0-443-15976-3

Article

Synergies of co-infecting pathogens, sea lice (Lepeophetheirus salmonis) and Moritella viscosa, are impacted by exposure order, and host response to initial infection

Cai W, Zhong L, Parrish K, Kumar S, Eslamloo K, Fajei E, Whyte SK, Purcell SL, Jahangiri L, Li R, Solares AC, Taylor RG, Balder R, Rise ML & Fast MD (2024) Synergies of co-infecting pathogens, sea lice (Lepeophetheirus salmonis) and Moritella viscosa, are impacted by exposure order, and host response to initial infection. Aquaculture, 591, Art. No.: 741115. https://doi.org/10.1016/j.aquaculture.2024.741115

Article

Characterization of the impact of dietary immunostimulant CpG on the expression of mRNA biomarkers involved in the immune responses in Atlantic salmon (Salmo salar)

Xue X, Eslamloo K, Caballero-Solares A, Katan T, Umasuthan N, Taylor RG, Fast MD, Andreassen R & Rise ML (2024) Characterization of the impact of dietary immunostimulant CpG on the expression of mRNA biomarkers involved in the immune responses in Atlantic salmon (Salmo salar). Fish & Shellfish Immunology, 153, Art. No.: 109840. https://doi.org/10.1016/j.fsi.2024.109840

Article

An aquaculture risk model to understand the causes and consequences of Atlantic Salmon mass mortality events: A review

Sajid Z, Gamperl AK, Parrish CC, Colombo SM, Santander J, Mather C, Neis B, Holmen IM, Filgueira R, McKenzie CH, Cavalli LS, Jeebhay M, Gao W, López Gómez MA & Caballero‐Solares A (2024) An aquaculture risk model to understand the causes and consequences of Atlantic Salmon mass mortality events: A review. Reviews in Aquaculture, 16 (4), pp. 1674-1695. https://doi.org/10.1111/raq.12917

Article

Transcriptomic response of lumpfish (Cyclopterus lumpus) head kidney to viral mimic, with a focus on the interferon regulatory factor family

Emam M, Kumar S, Eslamloo K, Caballero-Solares A, Hall JR, Xue X, Paradis H, Gendron RL, Santander J & Rise ML (2024) Transcriptomic response of lumpfish (Cyclopterus lumpus) head kidney to viral mimic, with a focus on the interferon regulatory factor family. Frontiers in Immunology, 15. https://doi.org/10.3389/fimmu.2024.1439465

Article

Studying interactions among anthropogenic stressors in freshwater ecosystems: A systematic review of 2396 multiple‐stressor experiments

Orr JA, Macaulay SJ, Mordente A, Burgess B, Albini D, Hunn JG, Restrepo‐Sulez K, Wilson R, Schechner A, Robertson AM, Lee B, Stuparyk BR, Singh D, O'Loughlin I & Juvigny‐Khenafou NPD (2024) Studying interactions among anthropogenic stressors in freshwater ecosystems: A systematic review of 2396 multiple‐stressor experiments. Ecology Letters, 27 (6), Art. No.: e14463. https://doi.org/10.1111/ele.14463

Article

Interacting Effects of Sea Louse (Lepeophtheirus salmonis) Infection and Formalin-Killed Aeromonas salmonicida on Atlantic Salmon Skin Transcriptome

Caballero-Solares A, Umasuthan N, Xue X, Katan T, Kumar S, Westcott JD, Chen Z, Fast MD, Skugor S, Taylor RG & Rise ML (2024) Interacting Effects of Sea Louse (Lepeophtheirus salmonis) Infection and Formalin-Killed Aeromonas salmonicida on Atlantic Salmon Skin Transcriptome. Frontiers in Immunology, 13. https://doi.org/10.3389/fimmu.2022.804987

Article

Cell atlas of the Atlantic salmon spleen reveals immune cell heterogeneity and cell-specific responses to bacterial infection

Sun J, Ruiz Daniels R, Balic A, Andresen AM, Bjørgen H, Dobie R, Henderson NC, Koppang EO, Martin SA, Fosse JH, Taylor RS & Macqueen DJ (2024) Cell atlas of the Atlantic salmon spleen reveals immune cell heterogeneity and cell-specific responses to bacterial infection. Fish & Shellfish Immunology, 145, Art. No.: 109358. https://doi.org/10.1016/j.fsi.2024.109358

Article

Effects of flow reduction and artificial light at night (ALAN) on litter decomposition and invertebrate communities in streams: A flume experiment

Juvigny-Khenafou NPD, Burgazzi G, Steiner N, Harvey E, Terui A, Piggott J, Manfrin A, Feckler A, Leese F & Schäfer RB (2024) Effects of flow reduction and artificial light at night (ALAN) on litter decomposition and invertebrate communities in streams: A flume experiment. Science of The Total Environment, 912, Art. No.: 168836. https://doi.org/10.1016/j.scitotenv.2023.168836

Review

A gap analysis on modelling of sea lice infection pressure from salmonid farms: (II) Identifying and ranking knowledge gaps: output of an international workshop

Murphy JM, Moriarty M, Brooker AJ, Waites W, Revie C, Adams TP, Lewis M, Reinardy HC, Phelan JP, Coyle JP, Rabe B, Ives SC, Armstrong JD, Sandvik AD & Asplin L (2024) A gap analysis on modelling of sea lice infection pressure from salmonid farms: (II) Identifying and ranking knowledge gaps: output of an international workshop [Sea lice gap analysis]. Aquaculture Environment Interactions, 16, pp. 27-42. https://doi.org/10.3354/aei00471