Institute of Aquaculture

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Article

Genetic parameters for whole weight and survival rate of the Portuguese oyster, Crassostrea angulata at different harvest stages after six generations of selection

Vu IV, Boudry P, Vengatesen T, Gheyas AA, Khanh TD, Nguyen TM, Htoo H, Kim HW, Kundu S, Minh TTN, Trung DTT, Nguyen TTA, Thu LT, O’Connor W & Luu GTH (2025) Genetic parameters for whole weight and survival rate of the Portuguese oyster, Crassostrea angulata at different harvest stages after six generations of selection. Aquaculture International, 33, Art. No.: 238. https://doi.org/10.1007/s10499-025-01925-w

Article

Benefits of dietary krill meal inclusion towards better utilization of nutrients, and response to oxidative stress in gilthead seabream (Sparus aurata) juveniles

Carvalho M, Montero D, Betancor M, Kaur K, Serradell A, Izquierdo M, Gines R, Claeyssens V & Torrecillas S (2025) Benefits of dietary krill meal inclusion towards better utilization of nutrients, and response to oxidative stress in gilthead seabream (Sparus aurata) juveniles. Aquaculture, 598, Art. No.: 741957. https://doi.org/10.1016/j.aquaculture.2024.741957

Article

Unraveling Genomic and Pathogenic Features of Aeromonas ichthyocola sp. nov., Aeromonas mytilicola sp. nov., and Aeromonas mytilicola subsp. aquatica subsp. nov.

Ajmi N, Duman M, Coskun B, Esen C, Sonmez O, Tasci G, Coskuner-Weber O, Ay H, Yoyen-Ermis D, Yibar A, Desbois AP & Saticioglu IB (2025) Unraveling Genomic and Pathogenic Features of Aeromonas ichthyocola sp. nov., Aeromonas mytilicola sp. nov., and Aeromonas mytilicola subsp. aquatica subsp. nov.. Animals, 15 (7), Art. No.: 948. https://doi.org/10.3390/ani15070948

Article

Interactions between nutritional programming, genotype, and gut microbiota in Atlantic salmon: Long-term effects on gut microbiota, fish growth and feed efficiency

Rimoldi S, Quiroz KF, Kalemi V, McMillan S, Stubhaug I, Martinez-Rubio L, Betancor MB & Terova G (2025) Interactions between nutritional programming, genotype, and gut microbiota in Atlantic salmon: Long-term effects on gut microbiota, fish growth and feed efficiency. Aquaculture, 596 (Part 1), p. 741813. https://doi.org/10.1016/j.aquaculture.2024.741813

Article

Dietary l-carnitine supplementation recovers the hepatic damage induced by high-fat diet in Nile tilapia (Oreochromis niloticus L.) via activation of Nrf2/Keap pathway and inhibition of pro-inflammatory cytokine

Assar DH, Salah AS, Rashwan AG, Al-Hawary II, Hendam BM, Elsheshtawy A, Al Ali A, Al Shmrany H & Elbialy ZI (2025) Dietary l-carnitine supplementation recovers the hepatic damage induced by high-fat diet in Nile tilapia (Oreochromis niloticus L.) via activation of Nrf2/Keap pathway and inhibition of pro-inflammatory cytokine. Fish Physiology and Biochemistry, 51, Art. No.: 40. https://doi.org/10.1007/s10695-024-01430-6

Article

High-density linkage map and single nucleotide polymorphism association with whole weight, meat yield, and shell shape in the Portuguese oyster, Crassostrea angulate

Vu S, Kumar M, Rastas P, Boudry P, Gheyas A, Bean T, Nguyen M, Tran K, Geist J, Nguyen H, O’Connor W, Tran H, Le T, Cao G, Nguyen T & Vu I (2024) High-density linkage map and single nucleotide polymorphism association with whole weight, meat yield, and shell shape in the Portuguese oyster, Crassostrea angulate. Aquaculture International, 32, p. 10109–10122. https://doi.org/10.1007/s10499-024-01652-8

Article

Building towards One Health: A Transdisciplinary Autoethnographic Approach to Understanding Perceptions of Sustainable Aquatic Foods in Vietnam

Li S, Ang SY, Hunter AM, Erdem S, Bostock J, Da CT, Nguyen NT, Moss A, Hope W, Howie C, Newton R, Casteleiro MA & Little D (2024) Building towards One Health: A Transdisciplinary Autoethnographic Approach to Understanding Perceptions of Sustainable Aquatic Foods in Vietnam. Sustainability, 16 (24), pp. 1-23, Art. No.: 10865. https://www.mdpi.com/2071-1050/16/24/10865; https://doi.org/10.3390/su162410865

Article

Isolation of intake mediated effects demonstrate that the phenomic benefits of dietary omega-3 are nominal to Atlantic salmon when reared in a challenging (hypoxic) environment

Glencross BD, Berry A, Clokie B, Hevroy E, Huyben D, Martinez-Rubio L, Mathew CA, Munoz P, MacKenzie S & Wilson RW (2024) Isolation of intake mediated effects demonstrate that the phenomic benefits of dietary omega-3 are nominal to Atlantic salmon when reared in a challenging (hypoxic) environment. Clokie B (Project Member) Aquaculture, 581, p. 740461. https://doi.org/10.1016/j.aquaculture.2023.740461

Article

Salmon Data Mobilization

Diack G, Bird T, Akenhead S, Bayer J, Brophy D, Bull C, de Eyto E, Johnson B, Jones M, Knight A, Nevoux M, van der Stap T & Walker A (2024) Salmon Data Mobilization. North Pacific Anadromous Fish Commission Bulletin, (7), pp. 61-76. https://doi.org/10.23849/npafcb7/x3rlpo23a

Article

Cell death induced by Lepeophtheirus salmonis labial gland protein 3 in salmonid fish leukocytes: A mechanism for disabling host immune responses

Midtbø HMD, Borchel A, Morton HC, Paley R, Monaghan S, Haugland GT & Øvergård A (2024) Cell death induced by Lepeophtheirus salmonis labial gland protein 3 in salmonid fish leukocytes: A mechanism for disabling host immune responses [Sea lice labial gland 3 leukocyte killing]. Fish & Shellfish Immunology, 154, Art. No.: 109992. https://doi.org/10.1016/j.fsi.2024.109992

Article

Synergies of co-infecting pathogens, sea lice (Lepeophetheirus salmonis) and Moritella viscosa, are impacted by exposure order, and host response to initial infection

Cai W, Zhong L, Parrish K, Kumar S, Eslamloo K, Fajei E, Whyte SK, Purcell SL, Jahangiri L, Li R, Solares AC, Taylor RG, Balder R, Rise ML & Fast MD (2024) Synergies of co-infecting pathogens, sea lice (Lepeophetheirus salmonis) and Moritella viscosa, are impacted by exposure order, and host response to initial infection. Aquaculture, 591, Art. No.: 741115. https://doi.org/10.1016/j.aquaculture.2024.741115

Article

Characterization of the impact of dietary immunostimulant CpG on the expression of mRNA biomarkers involved in the immune responses in Atlantic salmon (Salmo salar)

Xue X, Eslamloo K, Caballero-Solares A, Katan T, Umasuthan N, Taylor RG, Fast MD, Andreassen R & Rise ML (2024) Characterization of the impact of dietary immunostimulant CpG on the expression of mRNA biomarkers involved in the immune responses in Atlantic salmon (Salmo salar). Fish & Shellfish Immunology, 153, Art. No.: 109840. https://doi.org/10.1016/j.fsi.2024.109840

Article

An aquaculture risk model to understand the causes and consequences of Atlantic Salmon mass mortality events: A review

Sajid Z, Gamperl AK, Parrish CC, Colombo SM, Santander J, Mather C, Neis B, Holmen IM, Filgueira R, McKenzie CH, Cavalli LS, Jeebhay M, Gao W, López Gómez MA & Caballero‐Solares A (2024) An aquaculture risk model to understand the causes and consequences of Atlantic Salmon mass mortality events: A review. Reviews in Aquaculture, 16 (4), pp. 1674-1695. https://doi.org/10.1111/raq.12917

Article

Transcriptomic response of lumpfish (Cyclopterus lumpus) head kidney to viral mimic, with a focus on the interferon regulatory factor family

Emam M, Kumar S, Eslamloo K, Caballero-Solares A, Hall JR, Xue X, Paradis H, Gendron RL, Santander J & Rise ML (2024) Transcriptomic response of lumpfish (Cyclopterus lumpus) head kidney to viral mimic, with a focus on the interferon regulatory factor family. Frontiers in Immunology, 15. https://doi.org/10.3389/fimmu.2024.1439465

Article

Studying interactions among anthropogenic stressors in freshwater ecosystems: A systematic review of 2396 multiple‐stressor experiments

Orr JA, Macaulay SJ, Mordente A, Burgess B, Albini D, Hunn JG, Restrepo‐Sulez K, Wilson R, Schechner A, Robertson AM, Lee B, Stuparyk BR, Singh D, O'Loughlin I & Juvigny‐Khenafou NPD (2024) Studying interactions among anthropogenic stressors in freshwater ecosystems: A systematic review of 2396 multiple‐stressor experiments. Ecology Letters, 27 (6), Art. No.: e14463. https://doi.org/10.1111/ele.14463

Article

Interacting Effects of Sea Louse (Lepeophtheirus salmonis) Infection and Formalin-Killed Aeromonas salmonicida on Atlantic Salmon Skin Transcriptome

Caballero-Solares A, Umasuthan N, Xue X, Katan T, Kumar S, Westcott JD, Chen Z, Fast MD, Skugor S, Taylor RG & Rise ML (2024) Interacting Effects of Sea Louse (Lepeophtheirus salmonis) Infection and Formalin-Killed Aeromonas salmonicida on Atlantic Salmon Skin Transcriptome. Frontiers in Immunology, 13. https://doi.org/10.3389/fimmu.2022.804987

Article

Cell atlas of the Atlantic salmon spleen reveals immune cell heterogeneity and cell-specific responses to bacterial infection

Sun J, Ruiz Daniels R, Balic A, Andresen AM, Bjørgen H, Dobie R, Henderson NC, Koppang EO, Martin SA, Fosse JH, Taylor RS & Macqueen DJ (2024) Cell atlas of the Atlantic salmon spleen reveals immune cell heterogeneity and cell-specific responses to bacterial infection. Fish & Shellfish Immunology, 145, Art. No.: 109358. https://doi.org/10.1016/j.fsi.2024.109358